CDS

Accession Number TCMCG057C23038
gbkey CDS
Protein Id XP_018432668.1
Location complement(join(3758440..3758613,3758708..3759215,3759427..3759914))
Gene LOC108805193
GeneID 108805193
Organism Raphanus sativus

Protein

Length 389aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577166.1
Definition PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10604        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04120        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005769        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006513        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008277        [VIEW IN EMBL-EBI]
GO:0008333        [VIEW IN EMBL-EBI]
GO:0008589        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009738        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043949        [VIEW IN EMBL-EBI]
GO:0043951        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045744        [VIEW IN EMBL-EBI]
GO:0045879        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055081        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080144        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901527        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAACATAAGCAGCAGCGGAGGCGAAGGTAGACGCCGTAGACAACGGCGAACCAACACCCTTCCAACCGCCGCTCCACCTCCTCCTTCCCTTCCTCCACCGCCTCCTCCTCCGGCTACAGAACCTCCACCTAACCGAATCGTCTTCGCAGCAGCTACGCCGTACCCAAACCCTAACCCTAATCAGCATTACCACCAGTACCCTGGCTACTACCCTCCTCCGCCGGGAACCATGCTTCCGTCCCCTTACGATCACCACCACTATCCTCCTCCTCCGCATCCTTACCACCACCCTTGGACCGCCGGCGGGAGATACCCTTACCCTCCTGGACCCATGGTCTCTCAACCTTTCGTCGAGCATCAGAAAGCCGTCACGATTCGCAACGACGTTAATCTAAAAAAGGAGTCTTTGAAGCTCGAACCCGACCCGGATTGTCCGGGTCGGTTCCTCGTCTCCTTCACGTTTGATGCAACTGTCTCCGGCAGGATCACAGTCATTTTCTTCGCTAAAGAATCAGAAGAATGCGTTCTCACAGCGACTAAGGAAGACGTTCTGCCACCGATCACGATGGACTTCGAGGTAGGACTTGGCCAGAAGTTCAAGCAGCCTTCTGGTACGGGTATAGATTTCTCCGTCTTCGAAGACTCTGAGCTGTTCAAGACGGCGGAAGCGGATGTTTATCCCTTGGCGGTTAAGGCAGAAGCAGTAGCAGCAGCTCCTCCTTCAGGTGATGGAGAAGAGAGTTTGGGGTCGAAGAACGCGCAGATCACTCAAGCGGTGTATGAGAAGGATAAAGGGGAGATTAAAATAAGAGTGGTGAAGCAGATACTATGGGTTAACGAGACGAGGTATGAGCTTCAGGAGATTTATGGGATTGGGAATAGCGTTGATGGGGATGACGATTCGGCTGATGATGCTAATGATCCGGGGAAAGAGTGCGTTATATGTTTGTCTGAGCCACGTGACACGACTGTTCTTCCTTGTCGACACATGTGTATGTGTAGCGGATGCGCTAAGGTGTTGAGGTTCCAGACAAATCGATGCCCGATTTGCAGGCAACCTGTAGAAAGGCTTTTGGAGATAAAAGTTCACGGTAATAGCGGGGGAAGCGGGAACAATGCTGAACATGGAGCAACAGGTGAACAAGAGCAGTCACAACACGTCTGA
Protein:  
MGNISSSGGEGRRRRQRRTNTLPTAAPPPPSLPPPPPPPATEPPPNRIVFAAATPYPNPNPNQHYHQYPGYYPPPPGTMLPSPYDHHHYPPPPHPYHHPWTAGGRYPYPPGPMVSQPFVEHQKAVTIRNDVNLKKESLKLEPDPDCPGRFLVSFTFDATVSGRITVIFFAKESEECVLTATKEDVLPPITMDFEVGLGQKFKQPSGTGIDFSVFEDSELFKTAEADVYPLAVKAEAVAAAPPSGDGEESLGSKNAQITQAVYEKDKGEIKIRVVKQILWVNETRYELQEIYGIGNSVDGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVHGNSGGSGNNAEHGATGEQEQSQHV